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Tam, W.L., Miyao, Y. en Tsujii, J., Framework independent summarized parser output and its documentation, in: Proceedings of grammar engineering across framework 2007 (GEAF07), pagina's 319--331, 2007

Sagae, K., Miyao, Y. en Tsujii, J., HPSG parsing with shallow dependency constraints, in: Proceedings of the 44th Meeting of the Association for Computational Linguistics, pagina's 624--631, 2007

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Piao, S., Ananiadou, S. en McNaught, J., Integrating Annotation Tools into UIMA for Interoperability, in: Proceedings of the UK e-Science AHM Conference 2007, pagina's 575--582, 2007

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Tsuruoka, Y., McNaught, J., Tsujii, J. en Ananiadou, S., Learning string similarity measures for gene/protein name dictionary look-up using logistic regression (2007), in: Bioinformatics, 23:20(2768-2774)

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Piao, S., Ananiadou, S., Tsuruoka, Y., Sasaki, Y. en McNaught, J., Mining Opinion Polarity Relations of Citations, in: Proceedings of the 7th International Workshop on Computational Semantics, pagina's 366-371, 2007

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Araki, N., Yoshida, K., Tsuruoka, Y. en Tsujii, J., Move Prediction in Go with the Maximum Entropy Method, in: 2007 IEEE Symposium on Computational Intelligence and Games, pagina's 189-195, 2007

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Sasaki, Y., Rea, B. en Ananiadou, S., Multi-topic Aspects in Clinical Text Classification, in: BIBM '07: Proceedings of the 2007 IEEE International Conference on Bioinformatics and Biomedicine, pagina's 62--70, IEEE Computer Society, 2007

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Yoshida, K. en Tsujii, J., Reranking for Biomedical Named-Entity Recognition, in: Proceedings of BioNLP 2007: Biological, translational, and clinical language processing, pagina's 209--216, 2007

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Ananiadou, S., Cotter, P., Nobata, C., Okazaki, N., Rea, B., Sasaki, Y., Tsuruoka, Y. en Tsujii, J., SemText: a semantically enriched information retrieval system for biology, in: Proceedings of the 8th International Conference on Systems Biology (ICSB 2007), 2007

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Ananiadou, S., Procter, R., Rea, B., Sasaki, Y. en Thomas, J., Supporting Systematic Reviews using Text Mining, in: Proceedings of the 3rd International Conference on e-Social Science, 2007

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Rea, B. en Ananiadou, S., Text Mining Services to Support E-Research, in: UK e-Science All Hands Meeting, 2007

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Ananiadou, S., The National Centre for Text Mining: a Vision for the Future (2007), in: Ariadne, 53

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Miyao, Y., Sagae, K. en Tsujii, J., Towards Framework-Independent Evaluation of Deep Linguistic Parsers, in: Proceedings of Grammar Engineering across Frameworks (GEAF2007), pagina's 238--258, CSLI Publications, 2007

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Ohta, T., Miyao, Y., Ninomiya, T., Tsuruoka, Y., Yakushiji, A., Masuda, K., Takeuchi, J., Yoshida, K., Hara, T., Kim, J.-D., Tateisi, Y. en Tsujii, J., An Intelligent Search Engine and GUI-based Efficient MEDLINE Search Tool Based on Deep Syntactic Parsing, in: Proceedings of the COLING/ACL 2006 Interactive Presentation Sessions, pagina's 17-20, 2006

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Yakushiji, A., Miyao, Y., Ohta, T., Tateisi, Y. en Tsujii, J., Automatic Construction of Predicate-argument Structure Patterns for Biomedical Information Extraction, in: Proceedings of the 2006 Conference on Empirical Methods in Natural Language Processing (EMNLP), pagina's 284--292, 2006

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Chun, H.-W., Tsuruoka, Y., Kim, J.-D., Shiba, R., Nagata, N., Hishiki, T. en Tsujii, J., Automatic Recognition of Topic-Classified Relations between Prostate Cancer and Genes from Medline Abstracts, in: Proceedings of the Second International Symposium on Semantic Mining in Biomedicine, pagina's 5-12, 2006

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Ananiadou, S. en NenadiÄ‡, G., Automatic Terminology Management in Biomedicine, in: Text Mining for Biology and Biomedicine, pagina's 67--98, Artech House, Inc., 2006

Okazaki, N. en Ananiadou, S., Building an Abbreviation Dictionary using a Term Recognition Approach (2006), in: Bioinformatics, 22:24(3089-3095)

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Okazaki, N. en Ananiadou, S., Clustering Acronyms in Biomedical Text for Disambiguation, in: Proceedings of Fifth International conference on Language Resources and Evaluation (LREC 2006), pagina's 959-962, 2006

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Kim, J.-D. en Tsujii, J., Corpora and their Annotation, in: Text Mining for Biology and Biomedicine, Artech House, 2006

Chun, H.-W., Tsuruoka, Y., Kim, J.-D., Shiba, R., Nagata, N., Hishiki, T. en Tsujii, J., Extraction of Gene-Disease Relations from MedLine using Domain Dictionaries and Machine Learning, in: Proceedings of the Pacific Symposium on Biocomputing (PSB) 11, pagina's 4-15, 2006

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Ninomiya, T., Matsuzaki, T., Tsuruoka, Y., Miyao, Y. en Tsujii, J., Extremely Lexicalized Models for Accurate and Fast HPSG Parsing, in: Proceedings of EMNLP 2006, pagina's 155--163, 2006

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Okanohara, D., Miyao, Y., Tsuruoka, Y. en Tsujii, J., Improving the Scalability of Semi-Markov Conditional Random Fields for Named Entity Recognition, in: Proceedings of ACL 2006, 2006

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Ananiadou, S. en McNaught, J., Introduction to Text Mining in Biology, in: Text Mining for Biology and Biomedicine, pagina's 1--12, Artech House, Inc., 2006

Ohta, T., Tateisi, Y., Kim, J.-D., Yakushiji, A. en Tsujii, J., Linguistic and Biological Annotations of Biological Interaction Events, in: Proceedings of The Fifth International Conference on Language Resources and Evaluation (LREC 2006), pagina's 1402--1405, 2006

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