All publications

2013
Rak, R. and Ananiadou, S., Making UIMA Truly Interoperable with SPARQL, in: Proceedings of the 7th Linguistic Annotation Workshop and Interoperability with Discourse, Sofia, Bulgaria, pages 88-97, 2013
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Batista-Navarro, R., Rak, R. and Ananiadou, S., NaCTeM CTD Web Services, in: Proceedings of the Fourth BioCreative Challenge Evaluation Workshop, Bethesda, Maryland, USA, pages 85-89, 2013
Miwa, M. and Ananiadou, S., NaCTeM EventMine for BioNLP 2013 CG and PC tasks, in: Proceedings of BioNLP Shared Task 2013 Workshop, Sofia, Bulgaria, pages 94-98, Association for Computational Linguistics, 2013
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Rak, R., Batista-Navarro, R., Rowley, A., Miwa, M., Carter, J. and Ananiadou, S., NaCTeM’s BioC Modules and Resources for BioCreative IV, in: Proceedings of the Fourth BioCreative Challenge Evaluation Workshop, Bethesda, Maryland, USA, pages 61-67, 2013
Thompson, P., Nawaz, R., Korkontzelos, I., Black, W.J., McNaught, J. and Ananiadou, S., News Search Using Discourse Analytics, in: Proceedings of the 2013 Digital Heritage International Congress, Marseille, France, pages 597-604, IEEE, 2013
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Nédellec, C., Bossy, R., Kim, J.-D., Kim, J-J., Ohta, T., Pyysalo, S. and Zweigenbaum, P., Overview of BioNLP Shared Task 2013, in: Proceedings of the BioNLP Shared Task 2013 Workshop, pages 1--7, Association for Computational Linguistics, 2013
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Pyysalo, S., Ohta, T. and Ananiadou, S., Overview of the Cancer Genetics (CG) task of BioNLP Shared Task 2013, in: Proceedings of the BioNLP Shared Task 2013 Workshop, Sofia, Bulgaria, pages 58-66, Association for Computational Linguistics, 2013
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Ohta, T., Pyysalo, S., Rak, R., Rowley, A., Chun, H.-W., Jung, S. -J., Choi, S. -P. and Ananiadou, S., Overview of the Pathway Curation (PC) task of BioNLP Shared Task 2013, in: Proceedings of the BioNLP Shared Task 2013 Workshop, Sofia, Bulgaria, pages 67-75, Association for Computational Linguistics, 2013
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Mihăilă, C. and Ananiadou, S., Recognising Discourse Causality Triggers in the Biomedical Domain (2013), in: Journal of Bioinformatics and Computational Biology, 11:6(1343008)
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Korkontzelos, I., Zesch, T., Zanzotto, F. M. and Biemann, C., SemEval-2013 Task 5: Evaluating Phrasal Semantics., in: Proceedings of the 6th International Workshop on Semantic Evaluation (SemEval 2013), 2013
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Nawaz, R., Thompson, P. and Ananiadou, S., Something old, something new: identifying knowledge source in bio-events (2013), in: International Journal of Computational Linguistics and Applications, 4:1(129-144)
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Mihăilă, C., Kontonatsios, G., Batista-Navarro, R., Thompson, P., Korkontzelos, I. and Ananiadou, S., Towards a Better Understanding of Discourse: Integrating Multiple Discourse Annotation Perspectives Using UIMA, in: Proceedings of the 7th Linguistic Annotation Workshop and Interoperability with Discourse, Association for Computational Linguistics, Sofia, Bulgaria, pages 79-88, 2013
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Nawaz, R., Thompson, P. and Ananiadou, S., Towards Event-based Discourse Analysis of Biomedical Text (2013), in: International Journal of Computational Linguistics and Applications, 4:2(101-120)
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Kontonatsios, G., Korkontzelos, I., Tsujii, J. and Ananiadou, S., Using Random Forest to recognise translation equivalents of biomedical terms across languages, in: Proceedings of the Sixth Workshop on Building and Using Comparable Corpora, Sofia, Bulgaria, pages 95-104, Association for Computational Linguistics, 2013
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Mihăilă, C. and Ananiadou, S., What causes a causal relation? Detecting causal triggers in biomedical scientific discourse, in: 51st Annual Meeting of the Association for Computational Linguistics Proceedings of the Student Research Workshop, Sofia, Bulgaria, pages 38-45, Association for Computational Linguistics, 2013
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2012
Black, W.J., Procter, R., Gray, S. and Ananiadou, S., A data and analysis resource for an experiment in text mining a collection of micro-­blogs on a political topic, in: Proceedings of the Eighth International Conference on Language Resources and Evaluation (LREC 2012), pages 2083-2088, 2012
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Liakata, M., Thompson, P., de Waard, A., Nawaz, R., Pander Maat, H. and Ananiadou, S., A three-way perspective on scientific discourse annotation for knowledge extraction, in: Proceedings of the ACL Workshop on Detecting Structure in Scholarly Discourse (DSSD), pages 37-46, 2012
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Mihăilă, C., Batista-Navarro, R. and Ananiadou, S., Analysing Entity Type Variation across Biomedical Subdomains, in: Proceedings of the Third Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM 2012), Istanbul, Turkey, pages 1-7, 2012
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Rak, R., Rowley, A., Black, W.J. and Ananiadou, S., Argo: an integrative, interactive, text mining-based workbench supporting curation (2012), in: Database: The Journal of Biological Databases and Curation, 2012
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Wang, X., Thompson, P. and Ananiadou, S., Biomedical Chinese-English CLIR Using an Extended CMeSH Resource to Expand Queries, in: Proceedings of the Eighth International Conference on Language Resources and Evaluation (LREC 2012), pages 1148-1155, 2012
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