All publications sorted by recency
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Identification of Manner in Bio-Events, in: Proceedings of the Eighth International Conference on Language Resources and Evaluation (LREC 2012), pages 3505-3510, 2012 | , and ,
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brat: a Web-based Tool for NLP-Assisted Text Annotation, in: Proceedings of the Demonstrations at the 13th Conference of the European Chapter of the Association for Computational Linguistics, Avignon, France, pages 102-107, Association for Computational Linguistics, 2012 | , , , , and ,
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What's in a Name? Entity Type Variation across Two Biomedical Subdomains, in: Proceedings of the Student Research Workshop at the 13th Conference of the European Chapter of the Association for Computational Linguistics, Avignon, France, pages 38-45, Association for Computational Linguistics, 2012 | and ,
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Proximity-based Frameworks for Generating Embeddings from Multi-Output Data (2012), in: IEEE Transactions on Pattern Analysis and Machine Intelligence | , , and ,
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U-Compare bio-event meta-service: compatible BioNLP event extraction services (2011), in: BMC Bioinformatics, 12(481) | , , , , , , , , , , , , , , , , , , , , , , , , , , and ,
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Adding Text Mining Workflows as Web Services to the BioCatalogue, in: Proceedings of the 4th International Workshop on Semantic Web Aplications and Tools for the Life Sciences (SWAT4LS)., 2011 | , , and ,
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Extracting Bio-Molecular Events From Literature—The BioNLP’09 Shared Task (2011), in: Computational Intelligence, 27:4(513-540) | , , , and ,
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Extending a Tool Resource Framework with U-Compare, in: Proceedings of the 5th Language & Technology Conference (LTC'2011), 2011 | , , , and ,
Almost Total Recall: Semantic Category Disambiguation Using Large Lexical Resources and Approximate String Matching (2011), in: Proceedings of the Fourth International Symposium on Languages in Biology and Medicine (LBM 2011) | , , and ,
Adapting the Cluster Ranking Supervised Model to Resolve Coreferences in the Drug Literature, in: Proceedings of the Fourth International Symposium on Languages in Biology and Medicine (LBM 2011), 2011 | and ,
Pathway Curation Support as an Information Extraction Task, in: Proceedings of the Fourth International Symposium on Languages in Biology and Medicine (LBM 2011), 2011 | , , and ,
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Anatomical Entity Recognition with Open Biomedical Ontologies, in: Proceedings of the Fourth International Symposium on Languages in Biology and Medicine (LBM 2011), 2011 | , and ,
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Automatic extraction of microorganisms and their habitats from free text using text mining workflows (2011), in: Journal of Integrative Bioinformatics, 8:2(184) | , , , and ,
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Enriching a biomedical event corpus with meta-knowledge annotation (2011), in: BMC Bioinformatics, 12(393) | , , and ,
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The BioLexicon: a large-scale terminological resource for biomedical text mining (2011), in: BMC Bioinformatics, 12(397) | , , , , , , , , , , , , , and ,
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Promoting Interoperability of Resources in META-SHARE, in: Proceedings of the IJCNLP Workshop on Language Resources, Technology and Services in the Sharing Paradigm (LRTS), pages 50-58, 2011 | , , , , , and ,
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Text mining for efficient search and assisted creation of clinical trials, in: Proceedings of the ACM Fourth International Workshop on Data and Text Mining in Biomedical Informatics (DTMBIO 2011), 2011 | , , and ,
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Automatic Extraction of Angiogenesis Bio-Process from Text (2011), in: Bioinformatics, 27:19(2730-2737) | , , , , , and ,
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Why Biomedical Relation Extraction Results are Incomparable and What to do about it, in: Proceedings of the Third International Symposium on Semantic Mining in Biomedicine (SMBM 2008), pages 149--152, 2008 | , , and ,
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Demystifying protein annotations: toward increasing the compatibility of different corpora, in: Proceedings of the 3rd International Symposium on Languages in Biology and Medicine (LBM 2009), pages 103--108, 2009 | , , , , and ,
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An Analysis of Gene/Protein Associations at PubMed Scale, in: Proceedings of the fourth International Symposium for Semantic Mining in Biomedicine (SMBM 2010), 2010 | , and ,
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Event Extraction for DNA Methylation, in: Proceedings of the fourth International Symposium for Semantic Mining in Biomedicine (SMBM 2010), 2010 | , , and ,
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Event Extraction for Post-Translational Modifications, in: Proceedings of the 2010 Workshop on Biomedical Natural Language Processing, pages 19--27, Association for Computational Linguistics, 2010 | , , , and ,
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A re-evaluation of biomedical named entity-term relations (2010), in: Journal of Bioinformatics and Computational Biology (JBCB), 8:5(917--928) | , , and ,
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Overview of BioNLP 2011 Protein Coreference Shared Task, in: Proceedings of the BioNLP Shared Task 2011 Workshop, pages 74--82, Association for Computational Linguistics, 2011 | , and ,
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| 1-25 | 26-50 | 51-75 | 76-100 | 101-125 | 126-150 | 151-175 | 176-200 | 201-225 | 226-250 | 251-275 | 276-300 | 301-325 | 326-350 | 351-375 | 376-400 | 401-425 | 426-450 | 451-475 | 476-500 | 501-525 | 526-528 |