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Okazaki, N., Tsuruoka, Y., Ananiadou, S. en Tsujii, J., A Discriminative Candidate Generator for String Transformations, in: Proceedings of the 2008 Conference on Empirical Methods in Natural Language Processing (EMNLP 2008), pagina's 447-456, 2008
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Sun, X., Zhang, Y., Matsuzaki, T., Tsuruoka, Y. en Tsujii, J., A Discriminative Latent Variable Chinese Segmenter with Hybrid Word/Character Information, in: Proceedings of NAACL-HLT'09, pagina's 56--64, 2009
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Kocbek, S., Sætre, R., Stiglic, G., Kim, J.-D., Pernek, I., Tsuruoka, Y., Kokol, P., Ananiadou, S. en Tsujii, J., AGRA: Analysis of Gene Ranking Algorithms (2011), in: Bioinformatics, 27:8(1185-1186)
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[DOI] [URL]
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Yoshida, K., Tsuruoka, Y., Miyao, Y. en Tsujii, J., Ambiguous Part-of-Speech Tagging for Improving Accuracy and Domain Portability of Syntactic Parsers, in: Proceedings of the Twentieth International Joint Conference on Artificial Intelligence (IJCAI-07), pagina's 1783-1788, 2007
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Hahn, U., Buyko, E., Tomanek, K., Piao, S., McNaught, J., Tsuruoka, Y. en Ananiadou, S., An Annotation Type System for a Data-Driven NLP Pipeline, in: Proceedings of the Linguistic Annotation Workshop, pagina's 33--40, Association for Computational Linguistics, 2007
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Ohta, T., Miyao, Y., Ninomiya, T., Tsuruoka, Y., Yakushiji, A., Masuda, K., Takeuchi, J., Yoshida, K., Hara, T., Kim, J.-D., Tateisi, Y. en Tsujii, J., An Intelligent Search Engine and GUI-based Efficient MEDLINE Search Tool Based on Deep Syntactic Parsing, in: Proceedings of the COLING/ACL 2006 Interactive Presentation Sessions, pagina's 17-20, 2006
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Kocbek, S., Sætre, R., Stiglic, G., Kim, J.-D., Pernek, I., Tsuruoka, Y., Kokol, P., Ananiadou, S. en Tsujii, J., Analysis of gene ranking algorithms with extraction of relevant biomedical concepts from Pubmed publications, in: Proceedings of the 1st IEEE International Conference on Computational Advances in Bio and medical Sciences (ICCABS), 2011
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Chun, H.-W., Tsuruoka, Y., Kim, J.-D., Shiba, R., Nagata, N., Hishiki, T. en Tsujii, J., Automatic Recognition of Topic-Classified Relations between Prostate Cancer and Genes from Medline Abstracts, in: Proceedings of the Second International Symposium on Semantic Mining in Biomedicine, pagina's 5-12, 2006
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Tsuruoka, Y. en Tsujii, J., Bidirectional inference with the easiest-first strategy for tagging sequence data, in: HLT '05: Proceedings of the conference on Human Language Technology and Empirical Methods in Natural Language Processing, Vancouver, British Columbia, Canada, pagina's 467--474, Association for Computational Linguistics, 2005
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Piao, S., Buyko, E., Tsuruoka, Y., Tomanek, K., Kim, J.-D., McNaught, J., Hahn, U., Su, J. en Ananiadou, S., BOOTStrep Annotation Scheme: Encoding Information for Text Mining, in: Proceedings of the 4th Corpus Linguistics Conference (CL2007), 2007
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Sætre, R., Kemper, B., Oda, K., Okazaki, N., Matsuoka, Y., Kikuchi, N., Kitano, H., Tsuruoka, Y., Ananiadou, S. en Tsujii, J., Connecting Text Mining and Pathways using the PathText Resource, in: Proceedings of the Sixth International Conference on Language Resources and Evaluation (LREC 2008), pagina's 1736-1740, European Language Resources Association (ELRA), 2008
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Tsuruoka, Y., Tateisi, Y., Kim, J.-D., Ohta, T., McNaught, J., Ananiadou, S. en Tsujii, J., Developing a Robust Part-of-Speech Tagger for Biomedical Text, in: Advances in Informatics - 10th Panhellenic Conference on Informatics, pagina's 382--392, Springer-Verlag, 2005
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Tsuruoka, Y., Miwa, M., Hamamoto, K., Tsujii, J. en Ananiadou, S., Discovering and visualizing indirect associations between biomedical concepts (2011), in: Bioinformatics, 27:13(i111-i119)
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[DOI] [URL]
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Ninomiya, T., Tsuruoka, Y., Miyao, Y. en Tsujii, J., Efficacy of Beam Thresholding, Unification Filtering and Hybrid Parsing in Probabilistic HPSG Parsing, in: Proceedings of IWPT 2005, pagina's 103--114, 2005
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Chun, H.-W., Tsuruoka, Y., Kim, J.-D., Shiba, R., Nagata, N., Hishiki, T. en Tsujii, J., Extraction of Gene-Disease Relations from MedLine using Domain Dictionaries and Machine Learning, in: Proceedings of the Pacific Symposium on Biocomputing (PSB) 11, pagina's 4-15, 2006
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Ninomiya, T., Matsuzaki, T., Tsuruoka, Y., Miyao, Y. en Tsujii, J., Extremely Lexicalized Models for Accurate and Fast HPSG Parsing, in: Proceedings of EMNLP 2006, pagina's 155--163, 2006
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Kano, Y., Nguyen, N. T. H., Sætre, R., Yoshida, K., Miyao, Y., Tsuruoka, Y., Matsubayashi, Y., Ananiadou, S. en Tsujii, J., Filling the gaps between tools and users: a tool comparator, using protein-protein interaction as an example., in: Proceedings of the Pacific Symposium on Biocomputing 2008 (PSB 2008), pagina's 616--627, 2008
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Tekiner, F., Ananiadou, S., Tsuruoka, Y. en Tsujii, J., Highly Scalable Text Mining Parallel Tagging Application, in: Proceedings of ICSSCW2009, Famgusta, Cyprus, 2009
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