Publikationsliste - NaCTeM Publications

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Li, M., Myrman, A. F., Mu, T. und Ananiadou, S., Modelling Instance-Level Annotator Reliability for Natural Language Labelling Tasks, in: Proceedings of the 2019 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, Volume 1 (Long and Short Papers), Seiten 2873-2883, 2019

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Arase, Y. und Tsujii, J., Monolingual Phrase Alignment on Parse Forests, in: Proceedings of the 2017 Conference on Empirical Methods in Natural Language Processing, Seiten 1-11, 2017

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Araki, N., Yoshida, K., Tsuruoka, Y. und Tsujii, J., Move Prediction in Go with the Maximum Entropy Method, in: 2007 IEEE Symposium on Computational Intelligence and Games, Seiten 189-195, 2007

Sasaki, Y., Rea, B. und Ananiadou, S., Multi-topic Aspects in Clinical Text Classification, in: BIBM '07: Proceedings of the 2007 IEEE International Conference on Bioinformatics and Biomedicine, Seiten 62--70, IEEE Computer Society, 2007

Hatori, J., Murakami, A. und Tsujii, J., Multi-Topical Discussion Summarization using Structured Lexical Chains and Cue Words, in: Proceedings of CICLing 2011, Lecture Notes in Computer Science, Seiten 313-327, Springer, 2011

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Przybyɫa, P., Nguyen, N. T. H., Shardlow, M., Kontonatsios, G. und Ananiadou, S., NaCTeM at SemEval-2016 Task 1: Inferring sentence-level semantic similarity from an ensemble of complementary lexical and sentence-level features, in: Proceedings of the 10th International Workshop on Semantic Evaluation (SemEval 2016), Seiten 614-620, 2016

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Batista-Navarro, R., Rak, R. und Ananiadou, S., NaCTeM CTD Web Services, in: Proceedings of the Fourth BioCreative Challenge Evaluation Workshop, Bethesda, Maryland, USA, Seiten 85-89, 2013

Miwa, M. und Ananiadou, S., NaCTeM EventMine for BioNLP 2013 CG and PC tasks, in: Proceedings of BioNLP Shared Task 2013 Workshop, Sofia, Bulgaria, Seiten 94-98, Association for Computational Linguistics, 2013

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Wang, X., Rak, R., Restificar, A., Nobata, C., Rupp, C. J., Batista-Navarro, R., Nawaz, R. und Ananiadou, S., NaCTeM Systems for BioCreative III PPI Tasks, in: Proceedings of the BioCreative III Workshop, Seiten 142-147, 2010

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Rak, R., Batista-Navarro, R., Rowley, A., Miwa, M., Carter, J. und Ananiadou, S., NaCTeMâ€™s BioC Modules and Resources for BioCreative IV, in: Proceedings of the Fourth BioCreative Challenge Evaluation Workshop, Bethesda, Maryland, USA, Seiten 61-67, 2013

Ananiadou, S., Sullivan, D., Black, W.J., Levow, G., Gillespie, J., Mao, C., Pyysalo, S., Kolluru, B., Tsujii, J. und Sobral, B., Named Entity Recognition for Bacterial Type IV Secretion Systems (2011), in: PLoS ONE, 6:3(e14780)

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Trieu, H-L., Miwa, M. und Ananiadou, S., Named Entity Recognition for Cancer Immunology Research Using Distant Supervision, in: Proceedings of BioNLP 2022, Seiten 171-177, 2022

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Tsujii, J., Natural Language Processing and Computational Linguistics (2021), in: Computational Linguistics, 47:4(707-727)

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Zhang, T., Schoene, A und Ananiadou, S., Natural Language Processing Applied to Mental Illness Detection: A Narrative Review (2022), in: n p j Digital Medicine, 5(46)

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Nawaz, R., Thompson, P. und Ananiadou, S., Negated BioEvents: Analysis and Identification (2013), in: BMC Bioinformatics, 14:1(14)

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Min, E., Rong, Y, Xu, T., Bian, Y., Zhao, P., Da, L., Lin, K., Ananiadou, S. und Huang, J., Neighbour Interaction based Click-Through Rate Prediction via Graph-masked Transformer, in: Proceedings of SIGIR 2022, Seiten 353-362, 2022

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Wang, K., Stevens, R., Alachram, H., Li, Y., Soldatova, L. N., King, R. D., Ananiadou, S., Schoene, A, Li, M., Christopoulou, F., Ambite, J. L., Matthew, J., Garg, S., Hermjakob, U., Marcu, D., Sheng, E., Beissbarth, T., Wingender, E., Galstyan, A., Gao, X., Chambers, B., Pan, W., Khomtchouk, B. B., Evans, J. A. und Rzhetsky, A., NERO: a biomedical named-entity (recognition) ontology with a large, annotated corpus reveals meaningful associations through text embedding (2021), in: npj systems biology and applications, 7(38)

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Li, M. und Ananiadou, S., Neural Architectures for Aggregating Sequence Labels from Multiple Annotators (2022), in: Neurocomputing

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Yu, Z. und Ananiadou, S., Neuron-Level Knowledge Attribution in Large Language Models, in: Proceedings of the 2024 Conference on Empirical Methods in Natural Language Processing, Seiten 3267–3280, 2024

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Oda, K., Kim, J.-D., Ohta, T., Okanohara, D., Matsuzaki, T., Tateisi, Y. und Tsujii, J., New challenges for text mining: Mapping between text and manually curated pathways (2008), in: BMC Bioinformatics, 9:Suppl 3(S5)

Pyysalo, S., Stenetorp, P., Ohta, T., Kim, J.-D. und Ananiadou, S., New Resources and Perspectives for Biomedical Event Extraction, in: Proceedings of BioNLP 2012, Seiten 100-108, 2012

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Thompson, P., Nawaz, R., Korkontzelos, I., Black, W.J., McNaught, J. und Ananiadou, S., News Search Using Discourse Analytics, in: Proceedings of the 2013 Digital Heritage International Congress, Marseille, France, Seiten 597-604, IEEE, 2013

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Dengel, A., Etzioni, O., DeCario, N., Hoos, H., Li, F. -F., Tsujii, J. und Traverso, P., Next Big Challenges in Core AI Technology, Seiten 90-115, Springer, 2021

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Hu, G., Qin, K., Yuan, C., Peng, M., Lopez-Lira, A., Wang, B., Ananiadou, S., Huang, J. und Xie, Q., No Language is an Island: Unifying Chinese and English in Financial Large Language Models, Instruction Data, and Benchmarks, arXiv, 2024

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Tsuruoka, Y., McNaught, J. und Ananiadou, S., Normalizing biomedical terms by minimizing ambiguity and variability (2008), in: BMC Bioinformatics, 9:Suppl 3(S2)

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