Publication list - NaCTeM Publications

BROWSE
EXPORT
- Export all publications
SORT BY
- Author
- Title
- Type/Journal
- Year
- Recently added
SITE
- Help
- About this site
GUEST USER
Guest
LOGIN
Name:

Password:

Deutsch, English, Nederlands, Norsk, Português, <more...>

Dear guest, welcome to this publication database. As an anonymous user, you will probably not have edit rights. Also, the collapse status of the topic tree will not be persistent. If you like to have these and other options enabled, you might ask Admin for a login account.

This site is powered by Aigaion - A PHP/Web based management system for shared and annotated bibliographies. For more information visit www.aigaion.de.

| 1-25 | 26-50 | 51-75 | 76-100 | 101-125 | 126-150 | 151-175 | 176-200 | 201-225 | 226-250 | 251-275 | 276-300 | 301-325 | 326-350 | 351-375 | 376-400 | 401-425 | 426-450 | 451-475 | 476-500 | 501-525 | 526-546 |

Xu, Y., Chen, L., Wei, J., Ananiadou, S., Fan, Y., Qian, Y., Chang, E. I-C. and Tsujii, J., Bilingual term alignment from comparable corpora in English discharge summary and Chinese discharge summary (2015), in: BMC Bioinformatics, 16(149)

[DOI]
[URL]

Riedel, S., SÃ¦tre, R., Chun, H.-W., Takagi, T. and Tsujii, J., Bio-Molecular Event Extraction with Markov Logic (2011), in: Computational Intelligence, 27:4(558-582)

[DOI]
[URL]

Comeau, Donald C., Batista-Navarro, R., Dai, Hong-Jie, Islamaj DoÄŸan, Rezarta, Jimeno Yepes, Antonio, Khare, Ritu, Lu, Zhiyong, Marques, Hernani, Mattingly, Carolyn J., Neves, M., Peng, Yifan, Rak, R., Rinaldi, F., Tsai, Richard Tzong-Han, Verspoor, K., Wiegers, Thomas C., Wu, Cathy H. and Wilbur, W., BioC interoperability track overview (2014), in: Database: The Journal of Biological Databases and Curation, 2014

[DOI]
[URL]

MihÄƒilÄƒ, C., Ohta, T., Pyysalo, S. and Ananiadou, S., BioCause: Annotating and Analysing Causality in the Biomedical Domain (2013), in: BMC Bioinformatics, 14:1(2)

[DOI]
[URL]

Swainston, N., Batista-Navarro, R., Carbonel, P., Dobson, P., Dunstan, M., Jervis, A., Vinaixa, M., Williams, A., Ananiadou, S., Faulon, J. L., Mendes, P., Kell, D. B., Scrutton, N. and Breitling, R., biochem4j: integrated and extensible biochemical knowledge through graph databases (2017), in: PLOS ONE, 12:7(e0179130)

[DOI]
[URL]

Goldsack, T., Luo, Z., Xie, Q., Scarton, C., Shardlow, M., Ananiadou, S. and Lin, C., BioLaySumm 2023 Shared Task: Lay Summarisation of Biomedical Research Articles, in: Proceedings of BioNLP 2023, pages 468–477, 2023

[URL]

Sasaki, Y., Montemagni, S., Pezik, P., Rebholz-Schuhmann, D., McNaught, J. and Ananiadou, S., BioLexicon: A Lexical Resource for the Biology Domain, in: Proceedings of the Third International Symposium on Semantic Mining in Biomedicine (SMBM 2008), Turku, Finland, pages 109--116, Turku Centre for Computer Science (TUCS), 2008

Rebholz-Schuhmann, D., Pezik, P., Lee, V., Kim, J-J., del Gratta, R., Sasaki, Y., McNaught, J., Montemagni, S., Monachini, M., Calzolari, N. and Ananiadou, S., BioLexicon: Towards a Reference Terminological Resource in the Biomedical Domain, in: Proceedings of the of the 16th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB-2008), 2008

Sasaki, Y., Thompson, P., McNaught, J. and Ananiadou, S., Biological Event Recognition with Textual Induction, in: Proceedings of 3rd International Symposium on Languages in Biology and Medicine (LBM-2009), pages 91--96, 2009

[URL]

Wang, X., Thompson, P. and Ananiadou, S., Biomedical Chinese-English CLIR Using an Extended CMeSH Resource to Expand Queries, in: Proceedings of the Eighth International Conference on Language Resources and Evaluation (LREC 2012), pages 1148-1155, 2012

[URL]

Yakushiji, A., Miyao, Y., Tateisi, Y. and Tsujii, J., Biomedical Information Extraction with Predicate-Argument Structure Patterns, in: Proceedings of the First International Symposium on Semantic Mining in Biomedicine (SMBM), pages 60--69, 2005

Stenetorp, P., TopiÄ‡, G., Pyysalo, S., Ohta, T., Kim, J.-D. and Tsujii, J., BioNLP Shared Task 2011: Supporting Resources, in: Proceedings of the BioNLP Shared Task 2011 Workshop, pages 112--120, Association for Computational Linguistics, 2011

[URL]

Yamada, T., Kamata, R., Ishinohachi, K., Shojima, N., Ananiadou, S., Noma, H., Yamauchi, T. and Kadowaki, T., Biosimilar Versus Originator Insulins: Systematic review and meta-analysis (2018), in: Diabetes, Obesity and Metabolism

[DOI]
[URL]

Trieu, H-L., Miwa, M. and Ananiadou, S., BioVAE: a pre-trained latent variable language model for biomedical text mining (2022), 38:3(872-874)

[DOI]
[URL]

Miwa, M., Thompson, P. and Ananiadou, S., Boosting automatic event extraction from the literature using domain adaptation and coreference resolution (2012), in: Bioinformatics, 28:13(1759-1765)

[DOI]
[URL]

Korkontzelos, I., Piliouras, D., Dowsey, A. and Ananiadou, S., Boosting Drug Named Entity Recognition using an Aggregate Classifier (2015), in: Artificial Intelligence in Medicine (AIIM), Special issue of ICHI 2013 conference

[DOI]
[URL]

Venturi, G., Montemagni, S., Marchi, S., Sasaki, Y., Thompson, P., McNaught, J. and Ananiadou, S., Bootstrapping a Verb Lexicon for Biomedical Information Extraction, in: Proceedings of the 10th International Conference on Intelligent Text Processing and Computational Linguistics (CICLing 2009), pages 137--148, Springer, 2009

[URL]

Piao, S., Buyko, E., Tsuruoka, Y., Tomanek, K., Kim, J.-D., McNaught, J., Hahn, U., Su, J. and Ananiadou, S., BOOTStrep Annotation Scheme: Encoding Information for Text Mining, in: Proceedings of the 4th Corpus Linguistics Conference (CL2007), 2007

Stenetorp, P., Pyysalo, S., TopiÄ‡, G., Ohta, T., Ananiadou, S. and Tsujii, J., brat: a Web-based Tool for NLP-Assisted Text Annotation, in: Proceedings of the Demonstrations at the 13th Conference of the European Chapter of the Association for Computational Linguistics, Avignon, France, pages 102-107, Association for Computational Linguistics, 2012

[URL]

Uematsu, S., Kim, J.-D. and Tsujii, J., Bridging the Gap between Domain-Oriented and Linguistically-Oriented Semantics, in: Proceedings of BioNLP 2009 Workshop, pages 162--170, 2009

[URL]

Stenetorp, P., Pyysalo, S., Ohta, T., Ananiadou, S. and Tsujii, J., Bridging the Gap Between Scope-based and Event-based Negation/Speculation Annotations: A Bridge Not Too Far, in: Proceedings of ExProM 2012, pages 47-56, 2012

[URL]

Thompson, P., Cotter, P., McNaught, J., Ananiadou, S., Montemagni, S., Trabucco, A. and Venturi, G., Building a Bio-Event Annotated Corpus for the Acquisition of Semantic Frames from Biomedical Corpora, in: Proceedings of the Sixth International Conference on Language Resources and Evaluation (LREC 2008), pages 2159--2166, European Language Resources Association (ELRA), 2008

Batista-Navarro, R. and Ananiadou, S., Building a coreference-annotated corpus from the domain of biochemistry, in: Proceedings of BioNLP 2011, pages 83-91, 2011

[URL]

Okazaki, N., Ananiadou, S. and Tsujii, J., Building a High Quality Sense Inventory for Improved Abbreviation Disambiguation (2010), in: Bioinformatics, 26:9(1246-1253)

[DOI]
[URL]

processing time: 0.0704 seconds.