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Sætre, R., Yoshida, K., Miwa, M., Matsuzaki, T., Kano, Y. und Tsujii, J., Extracting Protein-Interactions from Text with the Unified AkaneRE Event Extraction System (2010), in: Transactions on Computational Biology and Bioinformatics (TCBB), BioCreative II.5 Special Issue, 7:3(442-453)
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Sasaki, Y., Wang, X. und Ananiadou, S., Extracting Secondary Bio-Event Arguments with Extraction Constraints (2011), in: Computational Intelligence, 27:4(702-721)
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Batista-Navarro, R., Kontonatsios, G., Mihăilă, C., Thompson, P., Rak, R., Nawaz, R., Korkontzelos, I. und Ananiadou, S., Facilitating the Analysis of Discourse Phenomena in an Interoperable NLP Platform, in: Computational Linguistics and Intelligent Text Processing, Seiten 559-571, Springer Berlin Heidelberg, 2013
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Tsuruoka, Y., Tsujii, J. und Ananiadou, S., Fast Full Parsing by Linear-Chain Conditional Random Fields, in: Proceedings of the 12th Conference of European Chapter of the Association for Computational Linguistics (EACL-09), Seiten 790--798, 2009
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Miyao, Y. und Tsujii, J., Feature Forest Models for Probabilistic HPSG Parsing (2008), in: Computational Linguistics, 34:1(35–80)
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Wu, X., Matsuzaki, T. und Tsujii, J., Fine-grained Tree-to-String Translation Rule Extraction, in: Proceedings of The 48th Annual Meeting of the Association for Computational Linguistics (ACL 2010), Seiten 325--334, 2010
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Xie, Q., Huang, J., Li, D., Chen, Z., Xiang, R., Xiao, M., Yu, Y., Somasundaram, V., Yang, K, Yuan, C., Luo, Z., Liu, Z., He, Y., Jiang, Y., Li, H., Feng, D., Liu, X. -Y., Wang, B., Wang, H., Lai, Y., Suchow, J., Lopez-Lira, A., Peng, M. und Ananiadou, S., FinNLP-AgentScen-2024 Shared Task: Financial Challenges in Large Language Models - FinLLMs, in: Proceedings of the Eighth Financial Technology and Natural Language Processing and the 1st Agent AI for Scenario Planning, Seiten 119- 126, 2024
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Liu, Z., Wang, K., Bao, Z., Zhang, X., Dong, J., Yang, K, Kabir, M., Giannouris, P., Xing, R., Park, S., Kim, J., Li, D., Xie, Q. und Ananiadou, S., FinNLP-FNP-LLMFinLegal-2025 Shared Task: Financial Misinformation Detection Challenge Task, in: Proceedings of the Joint Workshop of the 9th Financial Technology and Natural Language Processing (FinNLP), the 6th Financial Narrative Processing (FNP), and the 1st Workshop on Large Language Models for Finance and Legal (LLMFinLegal), Seiten 271–276, 2025
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Tam, W.L., Miyao, Y. und Tsujii, J., Framework independent summarized parser output and its documentation, in: Proceedings of grammar engineering across framework 2007 (GEAF07), Seiten 319--331, 2007
Ohta, T., Pyysalo, S. und Tsujii, J., From Pathways to Biomolecular Events: Opportunities and Challenges, in: Proceedings of the BioNLP 2011 Workshop, Seiten 105--113, Association for Computational Linguistics, 2011
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Sætre, R., Miwa, M., Yoshida, K. und Tsujii, J., From Protein-Protein Interaction to Molecular Event Extraction, in: Proceedings of the BioNLP 2009 Workshop Companion Volume for Shared Task, Seiten 103--106, 2009
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Kim, J.-D., Ohta, T., Oda, K. und Tsujii, J., From Text to Pathway: Corpus Annotation for Knowledge Acquisition from Biomedical Literature, in: Proceedings of the 6th Asia Pacific Bioinformatics Conference, Seiten 165-176, Imperial College Press, 2008
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