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Sun, X., Matsuzaki, T., Okanohara, D. und Tsujii, J., Latent Variable Perceptron Algorithm for Structured Classification, in: Proceedings of International Joint Conferences on Artificial Intelligence (IJCAI), Seiten 1236--1242, 2009
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Kim, J.-D., Ohta, T., Pyysalo, S., Kano, Y. und Tsujii, J., Overview of BioNLP'09 Shared Task on Event Extraction, in: Proceedings of the BioNLP 2009 Workshop Companion Volume for Shared Task, Seiten 1--9, 2009
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Nobata, C., Sasaki, Y., Okazaki, N., Rupp, C. J., Tsujii, J. und Ananiadou, S., Semantic Search on Digital Document Repositories based on Text Mining Results, in: International Conferences on Digital Libraries and the Semantic Web 2009 (ICSD2009), Seiten 34--48, 2009
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Pyysalo, S., Ohta, T., Kim, J.-D. und Tsujii, J., Static Relations: a Piece in the Biomedical Information Extraction Puzzle, in: Proceedings of BioNLP 2009 Workshop, Seiten 1--9, 2009
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Wu, X., Matsuzaki, T., Okazaki, N., Miyao, Y. und Tsujii, J., The UOT System: Improve String-to-Tree Translation Using Head-Driven Phrase Structure Grammar and Predicate-Argument Structures, in: Proceedings on the International Workshop on Spoken Language Translation (IWSLT), Seiten 99--106, 2009
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Okazaki, N., Tsuruoka, Y., Ananiadou, S. und Tsujii, J., A Discriminative Candidate Generator for String Transformations, in: Proceedings of the 2008 Conference on Empirical Methods in Natural Language Processing (EMNLP 2008), Seiten 447-456, 2008
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Sætre, R., Kemper, B., Oda, K., Okazaki, N., Matsuoka, Y., Kikuchi, N., Kitano, H., Tsuruoka, Y., Ananiadou, S. und Tsujii, J., Connecting Text Mining and Pathways using the PathText Resource, in: Proceedings of the Sixth International Conference on Language Resources and Evaluation (LREC 2008), Seiten 1736-1740, European Language Resources Association (ELRA), 2008
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Kano, Y., Nguyen, N. T. H., Sætre, R., Yoshida, K., Miyao, Y., Tsuruoka, Y., Matsubayashi, Y., Ananiadou, S. und Tsujii, J., Filling the gaps between tools and users: a tool comparator, using protein-protein interaction as an example., in: Proceedings of the Pacific Symposium on Biocomputing 2008 (PSB 2008), Seiten 616--627, 2008
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Kim, J.-D., Ohta, T., Oda, K. und Tsujii, J., From Text to Pathway: Corpus Annotation for Knowledge Acquisition from Biomedical Literature, in: Proceedings of the 6th Asia Pacific Bioinformatics Conference, Seiten 165-176, Imperial College Press, 2008
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Nobata, C., Cotter, P., Okazaki, N., Rea, B., Sasaki, Y., Tsuruoka, Y., Tsujii, J. und Ananiadou, S., Kleio: a knowledge-enriched information retrieval system for biology, in: Proceedings of the 31st annual international ACM SIGIR conference on Research and development in information retrieval, Singapore, Singapore, Seiten 787--788, ACM, 2008
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Sætre, R., Kemper, B., Oda, K., Okazaki, N., Matsuoka, Y., Kikuchi, N., Kitano, H., Tsuruoka, Y., Ananiadou, S. und Tsujii, J., PathText: Text Mining Tools Integrated with Biological Pathway, in: Genomes to Systems Conference 2008 Handbook, Seiten 65, The Consortium for Post-Genome Science, 2008
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Kano, Y., Nguyen, N. T. H., Sætre, R., Fukamachi, K., Yoshida, K., Miyao, Y., Tsuruoka, Y., Ananiadou, S. und Tsujii, J., Sharable type system design for tool inter-operability and combinatorial comparison, in: Proceedings of the First International Conference on Global Interoperability for Language Resources (ICGL), Seiten 122--129, 2008
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