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Publications of Tsujii, J. sorted by journal and type
Computatational Intelligence
| , , and , Discovering Robust Embeddings in (Dis)Similarity Space for High-Dimensional Lingustic Features (2012), in: Computatational Intelligence |
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Computational Intelligence
| , , , and , Bio-Molecular Event Extraction with Markov Logic (2011), in: Computational Intelligence, 27:4(558-582) |
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| , , , and , Extracting Bio-Molecular Events From Literature—The BioNLP’09 Shared Task (2011), in: Computational Intelligence, 27:4(513-540) |
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Computational Linguistics
| , Natural Language Processing and Computational Linguistics (2021), in: Computational Linguistics, 47:4(707-727) |
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| and , Feature Forest Models for Probabilistic HPSG Parsing (2008), in: Computational Linguistics, 34:1(35–80) |
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IBM Journal of Research and Development
| , , , , and , U-Compare: a modular NLP workflow construction and evaluation system (2011), in: IBM Journal of Research and Development, 55:3(11:1 - 11:10) |
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IEEE Transactions on Pattern Analysis and Machine Intelligence
| , , and , Proximity-based Frameworks for Generating Embeddings from Multi-Output Data (2012), in: IEEE Transactions on Pattern Analysis and Machine Intelligence |
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Information and Media Technologies
| , and , On Contribution of Sense Dependencies to Word Sense Disambiguation (2009), in: Information and Media Technologies, 4:4(1129--1155) |
International Journal of Medical Informatics
| , , and , Protein-Protein Interaction Extraction by Leveraging Multiple Kernels and Parsers (2009), in: International Journal of Medical Informatics, 78:12(e39--e46) |
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Journal of Bioinformatics and Computational Biology
| , , and , Event Extraction with Complex Event Classification Using Rich Features (2010), in: Journal of Bioinformatics and Computational Biology, 8:1(131--146) |
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Journal of Bioinformatics and Computational Biology (JBCB)
| , , and , A re-evaluation of biomedical named entity-term relations (2010), in: Journal of Bioinformatics and Computational Biology (JBCB), 8:5(917--928) |
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| , , , , and , Improving the Inter-corpora Compatibility for Protein Annotations (2010), in: Journal of Bioinformatics and Computational Biology (JBCB), 8:5(901-916) |
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Journal of Biomedical Informatics
| and , Improving the Performance of Dictionary-based Approaches in Protein Name Recognition (2004), in: Journal of Biomedical Informatics, 37:6(461-470) |
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| , and , Introduction: named entity recognition in biomedicine (2004), in: Journal of Biomedical Informatics, 37:6(393--395) |
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Journal of Biomedical Semantics
| , , and , Generalising semantic category disambiguation with large lexical resources for fun and profit (2014), in: Journal of Biomedical Semantics, 5(26) |
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Journal of Cheminformatics
| , , , , and , Annotation and Detection of Drug Effects in Text for Pharmacovigilance (2018), in: Journal of Cheminformatics, 10(37) |
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Journal of Natural Language Processing (Special Issue on Empirical Methods for Asian Language Processing)
| , , , , , and , Comparison of Chinese Treebanks for Corpus-oriented HPSG Grammar Development (2010), in: Journal of Natural Language Processing (Special Issue on Empirical Methods for Asian Language Processing) |
Language Resources and Evaluation
| and , Thesaurus or Logical Ontology, Which One Do We Need for Text Mining? (2005), in: Language Resources and Evaluation, 39:1(77-90) |
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Machine Learning
| and , Maximum Entropy Models with Inequality Constraints: A case study on text categorization (2005), in: Machine Learning, 60:1-3(169-194) |
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Machine Translation (Special Issue : Pushing the frontiers of SMT)
| , and , Improve Syntax-based Translation Using Deep Syntactic Structures (2010), in: Machine Translation (Special Issue : Pushing the frontiers of SMT) |
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Metabolomics
| , , , , , and , Mining Metabolites: Extracting the Yeast Metabolome from the Literature (2011), in: Metabolomics, 7:1(94-101) |
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PLOS ONE
| , , , , , , and , Anatomical entity recognition with a hierarchical framework augmented by external resources (2014), in: PLOS ONE, 9:10(e108396) |
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PLoS ONE
| , , , , , , , , and , Named Entity Recognition for Bacterial Type IV Secretion Systems (2011), in: PLoS ONE, 6:3(e14780) |
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| , , , and , Using Workflows to Explore and Optimise Named Entity Recognition for Chemistry (2011), in: PLoS ONE, 6:5(e20181) |
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Proceedings of the Fourth International Symposium on Languages in Biology and Medicine (LBM 2011)
| , , and , Almost Total Recall: Semantic Category Disambiguation Using Large Lexical Resources and Approximate String Matching (2011), in: Proceedings of the Fourth International Symposium on Languages in Biology and Medicine (LBM 2011) |