Publications of Tsujii, J. sorted by first author
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Overview of BioNLP 2011 Protein Coreference Shared Task, in: Proceedings of the BioNLP Shared Task 2011 Workshop, pages 74--82, Association for Computational Linguistics, 2011 | , and ,
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Challenges in Pronoun Resolution System for Biomedical Text, in: Proceedings of the 6th International Conference on Language Resources and Evaluation (LREC 2008), pages 2408--2412, 2008 | , and ,
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A log-linear model with an n-gram reference distribution for accurate HPSG parsing, in: Proceedings of the Tenth International Conference on Parsing Technologies (IWPT), Prague, Czech Republic, pages 60--68, 2007 | , , and ,
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Extremely Lexicalized Models for Accurate and Fast HPSG Parsing, in: Proceedings of EMNLP 2006, pages 155--163, 2006 | , , , and ,
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A Persistent Feature-Object Database for Intelligent Text Archive Systems, in: Natural Language Processing - IJCNLP 2004, pages 197--205, Springer-Verlag, 2005 | , and ,
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Efficacy of Beam Thresholding, Unification Filtering and Hybrid Parsing in Probabilistic HPSG Parsing, in: Proceedings of IWPT 2005, pages 103--114, 2005 | , , and ,
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Kleio: a knowledge-enriched information retrieval system for biology, in: Proceedings of the 31st annual international ACM SIGIR conference on Research and development in information retrieval, Singapore, Singapore, pages 787--788, ACM, 2008 | , , , , , , and ,
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Mining Metabolites: Extracting the Yeast Metabolome from the Literature (2011), in: Metabolomics, 7:1(94-101) | , , , , , and ,
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Semantic Search on Digital Document Repositories based on Text Mining Results, in: International Conferences on Digital Libraries and the Semantic Web 2009 (ICSD2009), pages 34--48, 2009 | , , , , and ,
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New challenges for text mining: Mapping between text and manually curated pathways (2008), in: BMC Bioinformatics, 9:Suppl 3(S5) | , , , , , and ,
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Incorporating GENETAG-style annotation to GENIA corpus, in: Proceedings of BioNLP 2009 Workshop, pages 106--107, 2009 | , , , and ,
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Medie and Info-pubmed: 2010 update (2010), in: BMC Bioinformatics, 11:Suppl 5(P7) | , , , , , and ,
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An Intelligent Search Engine and GUI-based Efficient MEDLINE Search Tool Based on Deep Syntactic Parsing, in: Proceedings of the COLING/ACL 2006 Interactive Presentation Sessions, pages 17-20, 2006 | , , , , , , , , , , and ,
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Pathway Curation Support as an Information Extraction Task, in: Proceedings of the Fourth International Symposium on Languages in Biology and Medicine (LBM 2011), 2011 | , , and ,
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A re-evaluation of biomedical named entity-term relations (2010), in: Journal of Bioinformatics and Computational Biology (JBCB), 8:5(917--928) | , , and ,
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Event Extraction for Post-Translational Modifications, in: Proceedings of the 2010 Workshop on Biomedical Natural Language Processing, pages 19--27, Association for Computational Linguistics, 2010 | , , , and ,
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Event Extraction for DNA Methylation, in: Proceedings of the fourth International Symposium for Semantic Mining in Biomedicine (SMBM 2010), 2010 | , , and ,
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From Pathways to Biomolecular Events: Opportunities and Challenges, in: Proceedings of the BioNLP 2011 Workshop, pages 105--113, Association for Computational Linguistics, 2011 | , and ,
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Overview of the Epigenetics and Post-translational Modifications (EPI) task of BioNLP Shared Task 2011, in: Proceedings of the BioNLP Shared Task 2011 Workshop, pages 16--25, Association for Computational Linguistics, 2011 | , and ,
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Open-domain Anatomical Entity Mention Detection, in: Proceedings of the ACL Workshop on Detecting Stucture in Scholarly Discourse (DSSD), pages 27-36, 2012 | , , and ,
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Linguistic and Biological Annotations of Biological Interaction Events, in: Proceedings of The Fifth International Conference on Language Resources and Evaluation (LREC 2006), pages 1402--1405, 2006 | , , , and ,
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Improving the Scalability of Semi-Markov Conditional Random Fields for Named Entity Recognition, in: Proceedings of ACL 2006, 2006 | , , and ,
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Learning Combination Features with L1 Regularization, in: Proceedings of NAACL-HLT, short papers, pages 97--100, 2009 | and ,
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Text Categorization with All Substring Features, in: SIAM International Conference on Data Mining (SDM), 2009 | and ,
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A discriminative language model with pseudo-negative samples, in: Proceedings of the 45th Annual Meeting of the Association of Computational Linguistics (ACL 2007), pages 73--80, Association for Computational Linguistics, 2007 | and ,
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