Ananiadou, S. - NaCTeM Publications

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Vorname(n):	S.
Nachname(n):	Ananiadou

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Kocbek, S., SÃ¦tre, R., Stiglic, G., Kim, J.-D., Pernek, I., Tsuruoka, Y., Kokol, P., Ananiadou, S. und Tsujii, J., Analysis of gene ranking algorithms with extraction of relevant biomedical concepts from Pubmed publications, in: Proceedings of the 1st IEEE International Conference on Computational Advances in Bio and medical Sciences (ICCABS), 2011

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Pyysalo, S., Ohta, T. und Ananiadou, S., Anatomical Entity Recognition with Open Biomedical Ontologies, in: Proceedings of the Fourth International Symposium on Languages in Biology and Medicine (LBM 2011), 2011

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Thomas, J., McNaught, J. und Ananiadou, S., Applications of text mining within systematic reviews (2011), in: Research Synthesis Methods, 2:1(1-14)

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Wang, X., McKendrick, I., Barrett, I., Dix, I., French, T., Tsujii, J. und Ananiadou, S., Automatic Extraction of Angiogenesis Bio-Process from Text (2011), in: Bioinformatics, 27:19(2730-2737)

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Kolluru, B., Nakjang, S., Hirt, R. P, Wipat, A. und Ananiadou, S., Automatic extraction of microorganisms and their habitats from free text using text mining workflows (2011), in: Journal of Integrative Bioinformatics, 8:2(184)

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Kolluru, B., Nakjang, S., Rupp, C. J., Hirt, R. P, Wipat, A. und Ananiadou, S., Automatic extraction of microorganisms and their habitats from free text using text-mining workflows, in: Proceedings of the International Symposium on Integrative Bioinformatics, 2011, 2011

Batista-Navarro, R. und Ananiadou, S., Building a coreference-annotated corpus from the domain of biochemistry, in: Proceedings of BioNLP 2011, Seiten 83-91, 2011

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Wang, X., Rak, R., Restificar, A., Nobata, C., Rupp, C. J., Batista-Navarro, R., Nawaz, R. und Ananiadou, S., Detecting Experimental Techniques and Selecting Relevant Documents for Protein-Protein Interactions from Biomedical Literature (2011), in: BMC Bioinformatics, 12:Suppl 8(S11)

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Tsuruoka, Y., Miwa, M., Hamamoto, K., Tsujii, J. und Ananiadou, S., Discovering and visualizing indirect associations between biomedical concepts (2011), in: Bioinformatics, 27:13(i111-i119)

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Batista-Navarro, R. und Ananiadou, S., Discovering Potential Drugs by Extracting Biological Activities of Natural Products, in: Proceedings of the Workshop on Mining the Pharmacogenomics Literature, Pacific Symopsium on Biocomputing, 2011

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Thompson, P., Nawaz, R., McNaught, J. und Ananiadou, S., Enriching a biomedical event corpus with meta-knowledge annotation (2011), in: BMC Bioinformatics, 12(393)

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Zervanou, K., Korkontzelos, I., van den Bosch, A. und Ananiadou, S., Enrichment and Structuring of Archival Description Metadata, in: Proceedings of the 5th ACL Workshop on Language Technology for Cultural Heritage, Social Sciences, and Humanities, Seiten 44-53, 2011

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Rosner, M., Attard, A., Thompson, P., Gatt, A. und Ananiadou, S., Extending a Tool Resource Framework with U-Compare, in: Proceedings of the 5th Language & Technology Conference (LTC'2011), 2011

Sasaki, Y., Wang, X. und Ananiadou, S., Extracting Secondary Bio-Event Arguments with Extraction Constraints (2011), in: Computational Intelligence, 27:4(702-721)

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Nobata, C., Dobson, P., Iqbal, S. A., Mendes, P., Tsujii, J., Kell, D. B. und Ananiadou, S., Mining Metabolites: Extracting the Yeast Metabolome from the Literature (2011), in: Metabolomics, 7:1(94-101)

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Ananiadou, S., Sullivan, D., Black, W.J., Levow, G., Gillespie, J., Mao, C., Pyysalo, S., Kolluru, B., Tsujii, J. und Sobral, B., Named Entity Recognition for Bacterial Type IV Secretion Systems (2011), in: PLoS ONE, 6:3(e14780)

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Pyysalo, S., Ohta, T., Rak, R., Sullivan, D., Mao, C., Wang, C., Sobral, B., Tsujii, J. und Ananiadou, S., Overview of the Infectious Diseases (ID) task of BioNLP Shared Task 2011, in: Proceedings of the BioNLP Shared Task 2011 Workshop, Seiten 26--35, Association for Computational Linguistics, 2011

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Ohta, T., Pyysalo, S., Ananiadou, S. und Tsujii, J., Pathway Curation Support as an Information Extraction Task, in: Proceedings of the Fourth International Symposium on Languages in Biology and Medicine (LBM 2011), 2011

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Thompson, P., Kano, Y., McNaught, J., Pettifer, S., Attwood, T. K., Keane, J. und Ananiadou, S., Promoting Interoperability of Resources in META-SHARE, in: Proceedings of the IJCNLP Workshop on Language Resources, Technology and Services in the Sharing Paradigm (LRTS), Seiten 50-58, 2011

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Korkontzelos, I., Mu, T., Restificar, A. und Ananiadou, S., Text mining for efficient search and assisted creation of clinical trials, in: Proceedings of the ACM Fourth International Workshop on Data and Text Mining in Biomedical Informatics (DTMBIO 2011), 2011

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Thompson, P., McNaught, J., Montemagni, S., Calzolari, N., del Gratta, R., Lee, V., Marchi, S., Monachini, M., Pezik, P., Quochi, V., Rupp, C. J., Sasaki, Y., Venturi, G., Rebholz-Schuhmann, D. und Ananiadou, S., The BioLexicon: a large-scale terminological resource for biomedical text mining (2011), in: BMC Bioinformatics, 12(397)

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Ananiadou, S., Thompson, P., Kano, Y., McNaught, J., Attwood, T. K., Day, P. J. R., Keane, J., Jackson, D. und Pettifer, S., Towards Interoperability of European Language Resources (2011), in: Ariadne, 67

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Kano, Y., BjÃ¶rne, J., Ginter, F., Salakoski, T., Buyko, E., Hahn, U., Cohen, K. B., Verspoor, K., Roeder, C., Hunter, L., Kilicoglu, H., Bergler, S., Van Landeghem, S., Van Parys, T., Van de Peer, Y., Miwa, M., Ananiadou, S., Neves, M., Pascual-Montano, A., Ozgur, A., Radev, D. R., Riedel, S., SÃ¦tre, R., Chun, H.-W., Kim, J.-D., Pyysalo, S., Ohta, T. und Tsujii, J., U-Compare bio-event meta-service: compatible BioNLP event extraction services (2011), in: BMC Bioinformatics, 12(481)

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Kano, Y., Miwa, M., Cohen, K. B., Hunter, L., Ananiadou, S. und Tsujii, J., U-Compare: a modular NLP workflow construction and evaluation system (2011), in: IBM Journal of Research and Development, 55:3(11:1 - 11:10)

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Kolluru, B., Hawizy, L., Murray-Rust, P., Tsujii, J. und Ananiadou, S., Using Workflows to Explore and Optimise Named Entity Recognition for Chemistry (2011), in: PLoS ONE, 6:5(e20181)

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