Publicaties van Pyysalo, S. gesorteerd op titel
A
A Comparative Study of Syntactic Parsers for Event Extraction, in: Proceedings of BioNLP 2010, ACL., pagina's 37--45, 2010 | , , en ,
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A method for integrating and ranking the evidence for biochemical pathways by mining reactions from text (2013), in: Bioinformatics, 29:13(i44-i52) | , , , , , en ,
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A re-evaluation of biomedical named entity-term relations (2010), in: Journal of Bioinformatics and Computational Biology (JBCB), 8:5(917--928) | , , en ,
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Almost Total Recall: Semantic Category Disambiguation Using Large Lexical Resources and Approximate String Matching (2011), in: Proceedings of the Fourth International Symposium on Languages in Biology and Medicine (LBM 2011) | , , en ,
An Analysis of Gene/Protein Associations at PubMed Scale, in: Proceedings of the fourth International Symposium for Semantic Mining in Biomedicine (SMBM 2010), 2010 | , en ,
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Anatomical Entity Mention Recognition at Literature Scale (2014), in: Bioinformatics, 30:6(868-875) | en ,
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Anatomical Entity Recognition with Open Biomedical Ontologies, in: Proceedings of the Fourth International Symposium on Languages in Biology and Medicine (LBM 2011), 2011 | , en ,
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B
BioCause: Annotating and Analysing Causality in the Biomedical Domain (2013), in: BMC Bioinformatics, 14:1(2) | , , en ,
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BioLexicon: A Lexical Resource for the Biology Domain, in: Proceedings of the Third International Symposium on Semantic Mining in Biomedicine (SMBM 2008), Turku, Finland, pagina's 109--116, Turku Centre for Computer Science (TUCS), 2008 | , , , , en ,
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BioNLP Shared Task 2011: Supporting Resources, in: Proceedings of the BioNLP Shared Task 2011 Workshop, pagina's 112--120, Association for Computational Linguistics, 2011 | , , , , en ,
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B
brat: a Web-based Tool for NLP-Assisted Text Annotation, in: Proceedings of the Demonstrations at the 13th Conference of the European Chapter of the Association for Computational Linguistics, Avignon, France, pagina's 102-107, Association for Computational Linguistics, 2012 | , , , , en ,
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B
Bridging the Gap Between Scope-based and Event-based Negation/Speculation Annotations: A Bridge Not Too Far, in: Proceedings of ExProM 2012, pagina's 47-56, 2012 | , , , en ,
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C
Complex event extraction at PubMed scale (2010), in: Bioinformatics, 26:12(i382-i390) | , , , en ,
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D
Demystifying protein annotations: toward increasing the compatibility of different corpora, in: Proceedings of the 3rd International Symposium on Languages in Biology and Medicine (LBM 2009), pagina's 103--108, 2009 | , , , , en ,
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Distributional Semantics Resources for Biomedical Text Processing, in: Proceedings of LBM 2013, pagina's 39-44, 2013 | , , , en ,
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E
Evaluating Dependency Representation for Event Extraction, in: Proceedings of the 23rd International Conference on Computational Linguistics (COLING 2010), pagina's 779-787, 2010 | , , en ,
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Event extraction across multiple levels of biological organization (2012), in: Bioinformatics, 28:18(i575-i581) | , , , , en ,
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Event Extraction for DNA Methylation, in: Proceedings of the fourth International Symposium for Semantic Mining in Biomedicine (SMBM 2010), 2010 | , , en ,
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Event Extraction for Post-Translational Modifications, in: Proceedings of the 2010 Workshop on Biomedical Natural Language Processing, pagina's 19--27, Association for Computational Linguistics, 2010 | , , , en ,
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Event extraction for systems biology by text mining the literature (2010), in: Trends in Biotechnology, 28:7(381-390) | , , en ,
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Extracting Bio-Molecular Events From Literature—The BioNLP’09 Shared Task (2011), in: Computational Intelligence, 27:4(513-540) | , , , en ,
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F
From Pathways to Biomolecular Events: Opportunities and Challenges, in: Proceedings of the BioNLP 2011 Workshop, pagina's 105--113, Association for Computational Linguistics, 2011 | , en ,
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G
Generalising semantic category disambiguation with large lexical resources for fun and profit (2014), in: Journal of Biomedical Semantics, 5(26) | , , en ,
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I
Improving the Inter-corpora Compatibility for Protein Annotations (2010), in: Journal of Bioinformatics and Computational Biology (JBCB), 8:5(901-916) | , , , , en ,
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Incorporating GENETAG-style annotation to GENIA corpus, in: Proceedings of BioNLP 2009 Workshop, pagina's 106--107, 2009 | , , , en ,
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