Miwa, M. - NaCTeM Publications

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First name(s):	M.
Last name(s):	Miwa

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O'Mara-Eves, A., Thomas, J., McNaught, J., Miwa, M. and Ananiadou, S., Using text mining for study identification in systematic reviews: A systematic review of current approaches (2015), in: Systematic Reviews, 4:1

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Miwa, M., Thompson, P., Korkontzelos, I. and Ananiadou, S., Comparable Study of Event Extraction in Newswire and Biomedical Domains, in: Proceedings of Coling 2014, pages 2270 -2279, 2014

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Miwa, M., Thomas, J., O'Mara-Eves, A. and Ananiadou, S., Reducing systematic review workload through certainty-based screening (2014), in: Journal of Biomedical Informatics

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Miwa, M., Ohta, T., Rak, R., Rowley, A., Kell, D. B., Pyysalo, S. and Ananiadou, S., A method for integrating and ranking the evidence for biochemical pathways by mining reactions from text (2013), in: Bioinformatics, 29:13(i44-i52)

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Miwa, M. and Ananiadou, S., NaCTeM EventMine for BioNLP 2013 CG and PC tasks, in: Proceedings of BioNLP Shared Task 2013 Workshop, Sofia, Bulgaria, pages 94-98, Association for Computational Linguistics, 2013

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Rak, R., Batista-Navarro, R., Rowley, A., Miwa, M., Carter, J. and Ananiadou, S., NaCTeMâ€™s BioC Modules and Resources for BioCreative IV, in: Proceedings of the Fourth BioCreative Challenge Evaluation Workshop, Bethesda, Maryland, USA, pages 61-67, 2013

Miwa, M., Pyysalo, S., Ohta, T. and Ananiadou, S., Wide coverage biomedical event extraction using multiple partially overlapping corpora (2013), in: BMC Bioinformatics, 14:175

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Miwa, M., Thompson, P. and Ananiadou, S., Boosting automatic event extraction from the literature using domain adaptation and coreference resolution (2012), in: Bioinformatics, 28:13(1759-1765)

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Mu, T., Miwa, M., Tsujii, J. and Ananiadou, S., Discovering Robust Embeddings in (Dis)Similarity Space for High-Dimensional Lingustic Features (2012), in: Computatational Intelligence

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Pyysalo, S., Ohta, T., Miwa, M., Cho, H. -C., Tsujii, J. and Ananiadou, S., Event extraction across multiple levels of biological organization (2012), in: Bioinformatics, 28:18(i575-i581)

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Miwa, M., Thompson, P., McNaught, J., Kell, D. B. and Ananiadou, S., Extracting semantically enriched events from biomedical literature (2012), in: BMC Bioinformatics, 13(108)

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Tsuruoka, Y., Miwa, M., Hamamoto, K., Tsujii, J. and Ananiadou, S., Discovering and visualizing indirect associations between biomedical concepts (2011), in: Bioinformatics, 27:13(i111-i119)

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Pyysalo, S., Ohta, T., Miwa, M. and Tsujii, J., Towards Exhaustive Event Extraction for Protein Modifications, in: Proceedings of the BioNLP 2011 Workshop, pages 114--123, Association for Computational Linguistics, 2011

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Kano, Y., BjÃ¶rne, J., Ginter, F., Salakoski, T., Buyko, E., Hahn, U., Cohen, K. B., Verspoor, K., Roeder, C., Hunter, L., Kilicoglu, H., Bergler, S., Van Landeghem, S., Van Parys, T., Van de Peer, Y., Miwa, M., Ananiadou, S., Neves, M., Pascual-Montano, A., Ozgur, A., Radev, D. R., Riedel, S., SÃ¦tre, R., Chun, H.-W., Kim, J.-D., Pyysalo, S., Ohta, T. and Tsujii, J., U-Compare bio-event meta-service: compatible BioNLP event extraction services (2011), in: BMC Bioinformatics, 12(481)

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Kano, Y., Miwa, M., Cohen, K. B., Hunter, L., Ananiadou, S. and Tsujii, J., U-Compare: a modular NLP workflow construction and evaluation system (2011), in: IBM Journal of Research and Development, 55:3(11:1 - 11:10)

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Miwa, M., Pyysalo, S., Hara, T. and Tsujii, J., A Comparative Study of Syntactic Parsers for Event Extraction, in: Proceedings of BioNLP 2010, ACL., pages 37--45, 2010

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Taura, K., Matsuzaki, T., Miwa, M., Kamoshida, Y., Yokoyama, D., Dun, N., Shibata, T., Jun, C. S. and Tsujii, J., Design and Implementation of GXP Make -- A Workflow System Based on Make, in: Proceedings of the 2010 IEEE Sixth International Conference on e-Science, pages 214--221, IEEE Computer Society, 2010

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Miwa, M., Miyao, Y., SÃ¦tre, R. and Tsujii, J., Entity-Focused Sentence Simplification for Relation Extraction, in: Proceedings of the 23rd International Conference on Computational Linguistics (COLING 2010), pages 788-796, 2010

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Miwa, M., Pyysalo, S., Hara, T. and Tsujii, J., Evaluating Dependency Representation for Event Extraction, in: Proceedings of the 23rd International Conference on Computational Linguistics (COLING 2010), pages 779-787, 2010

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Ohta, T., Pyysalo, S., Miwa, M. and Tsujii, J., Event Extraction for DNA Methylation, in: Proceedings of the fourth International Symposium for Semantic Mining in Biomedicine (SMBM 2010), 2010

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Ohta, T., Pyysalo, S., Miwa, M., Kim, J.-D. and Tsujii, J., Event Extraction for Post-Translational Modifications, in: Proceedings of the 2010 Workshop on Biomedical Natural Language Processing, pages 19--27, Association for Computational Linguistics, 2010

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Miwa, M., SÃ¦tre, R., Kim, J.-D. and Tsujii, J., Event Extraction with Complex Event Classification Using Rich Features (2010), in: Journal of Bioinformatics and Computational Biology, 8:1(131--146)

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