Ananiadou, S. - NaCTeM Publications - Aigaion 2.0

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First name(s):	S.
Last name(s):	Ananiadou

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Shardlow, M., Przybyɫa, P., Batista-Navarro, R., Carter, J., McNaught, J. and Ananiadou, S., Facilitating and promoting web annotation with Argo, in: Proceedings of I Annotate 2016, 2016

Batista-Navarro, R., Kontonatsios, G., MihÄƒilÄƒ, C., Thompson, P., Rak, R., Nawaz, R., Korkontzelos, I. and Ananiadou, S., Facilitating the Analysis of Discourse Phenomena in an Interoperable NLP Platform, in: Computational Linguistics and Intelligent Text Processing, pages 559-571, Springer Berlin Heidelberg, 2013

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Tsuruoka, Y., Tsujii, J. and Ananiadou, S., FACTA: a text search engine for finding associated biomedical concepts (2008), in: Bioinformatics, 24:21(2259-60)

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Luo, Z., Xie, Q. and Ananiadou, S., Factual consistency evaluation of summarization in the Era of large language models (2024), in: Expert Systems with Applications, 254(124456)

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Tsuruoka, Y., Tsujii, J. and Ananiadou, S., Fast Full Parsing by Linear-Chain Conditional Random Fields, in: Proceedings of the 12th Conference of European Chapter of the Association for Computational Linguistics (EACL-09), pages 790--798, 2009

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Kano, Y., Nguyen, N. T. H., SÃ¦tre, R., Yoshida, K., Miyao, Y., Tsuruoka, Y., Matsubayashi, Y., Ananiadou, S. and Tsujii, J., Filling the gaps between tools and users: a tool comparator, using protein-protein interaction as an example., in: Proceedings of the Pacific Symposium on Biocomputing 2008 (PSB 2008), pages 616--627, 2008

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Xie, Q., Han, W., Chen, Z., Xiang, R., Zhang, X., He, Y., Xiao, M., Li, D., Dai, Y., Feng, D., Xu, Y., Kang, H., Kuang, Z., Yuan, C., Yang, K, Luo, Z., Zhang, T., Liu, Z., Xiong, G., Deng, Z., Jiang, Y., Yao, Z., Li, H., Yu, Y., Lopez-Lira, A., Wang, B., Lai, Y., Wang, H., Peng, M., Ananiadou, S. and Huang, J., FinBen: An Holistic Financial Benchmark for Large Language Models, in: Proceedings of the Thirty-Eighth Annual Conference on Neural Information Processing Systems (NeurIPS), 2024

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Xie, Q., Huang, J., Li, D., Chen, Z., Xiang, R., Xiao, M., Yu, Y., Somasundaram, V., Yang, K, Yuan, C., Luo, Z., Liu, Z., He, Y., Jiang, Y., Li, H., Feng, D., Liu, X. -Y., Wang, B., Wang, H., Lai, Y., Suchow, J., Lopez-Lira, A., Peng, M. and Ananiadou, S., FinNLP-AgentScen-2024 Shared Task: Financial Challenges in Large Language Models - FinLLMs, in: Proceedings of the Eighth Financial Technology and Natural Language Processing and the 1st Agent AI for Scenario Planning, pages 119- 126, 2024

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Liu, Z., Zhang, X., Yang, K, Xie, Q., Huang, J. and Ananiadou, S., FMDLlama: Financial Misinformation Detection based on Large Language Models, arXiv, 2024

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Cao, J., Peek, N., Renehan, A. G and Ananiadou, S., Gaussian Distributed Prototypical Network for Few-shot Genomic Variant Detection, in: Proceedings of BioNLP 2023, pages 26–36, 2023

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Bishop, J., Xie, Q. and Ananiadou, S., GenCompareSum: a hybrid unsupervised summarization method using salience, in: Proceedings of BioNLP 2022, pages 220–240, 2022

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Stenetorp, P., Pyysalo, S., Ananiadou, S. and Tsujii, J., Generalising semantic category disambiguation with large lexical resources for fun and profit (2014), in: Journal of Biomedical Semantics, 5(26)

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Meziane, F., Athanasakis, N. and Ananiadou, S., Generating Natural Language specifications from UML class diagrams (2008), in: Requirements Engineering, 13:1(1--18)

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Cao, J. and Ananiadou, S., GenerativeRE: Incorporating a Novel Copy Mechanism and Pretrained Model for Joint Entity and Relation Extraction, in: Findings of EMNLP, pages 2119–2126, 2021

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Liu, B, Schlegel, V., Thompson, P., Batista-Navarro, R. and Ananiadou, S., Global information-aware argument mining based on a top-down multi-turn QA model (2023), in: Information Processing & Management, 60:5(103445)

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Luo, Z., Liu, L., Ananiadou, S. and Xie, Q., Graph Contrastive Topic Model (2024), in: Expert Systems with Applications, 255:Part C(124631)

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Xie, Q., Huang, J., Saha, T and Ananiadou, S., GRETEL: Graph Contrastive Topic Enhanced Language Model for Long Document Extractive Summarization, in: Proceedings of COLING, pages 6259–6269, 2022

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Wang, Y., Feng, D., Dai, Y., Chen, Z., Huang, J., Ananiadou, S., Xie, Q. and Wang, H., HARMONIC: Harnessing LLMs for Tabular Data Synthesis and Privacy Protection, in: Proceedings of the Thirty-Eighth Annual Conference on Neural Information Processing Systems (NeurIPS), 2024

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Black, W.J., Rupp, C. J., Nobata, C., McNaught, J., Tsujii, J. and Ananiadou, S., High-Precision Semantic Search by Generating and Testing Questions, in: Proceedings of the UK e-Science All Hands Meeting, 2010

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Tekiner, F., Ananiadou, S., Tsuruoka, Y. and Tsujii, J., Highly Scalable Text Mining Parallel Tagging Application, in: Proceedings of ICSSCW2009, Famgusta, Cyprus, 2009

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Yu, Z. and Ananiadou, S., How do Large Language Models Learn In-Context? Query and Key Matrices of In-Context Heads are Two Towers for Metric Learning, in: Proceedings of the 2024 Conference on Empirical Methods in Natural Language Processing, pages 3281–3292, 2024

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Sasaki, Y., Tsuruoka, Y., McNaught, J. and Ananiadou, S., How to make the most of NE dictionaries in statistical NER (2008), in: BMC Bioinformatics, 9:Suppl 11(S5)

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Sasaki, Y., Tsuruoka, Y., McNaught, J. and Ananiadou, S., How to Make the Most of NE Dictionaries in Statistical NER, in: Proceedings of the Workshop on Current Trends in Biomedical Natural Language Processing (BioNLP 2008), pages 63--70, Association for Computational Linguistics, 2008

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Inan, E., Thompson, P., Yates, T. and Ananiadou, S., HSEarch: semantic search system for workplace accident reports, in: Proceedings of the 43rd European Confererence on Information Retrieval (ECIR 2021), pages 514-519, 2021

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Thompson, P. and Ananiadou, S., HYPHEN: A flexible, hybrid method to map phenotype concept mentions to terminological resources (2018), in: Terminology, 24:1(91-121)

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