Publications of Tsujii, J. sorted by recency
SimSem: Fast Approximate String Matching in Relation to Semantic Category Disambiguation, in: Proceedings of the BioNLP 2011 Workshop, pages 136-145, Association for Computational Linguistics, 2011 | , and ,
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Effective Use of Function Words for Rule Generalization in Forest-Based Translation, in: Proceedings of ACL-HLT 2011, pages 22-31, 2011 | , and ,
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Multi-Topical Discussion Summarization using Structured Lexical Chains and Cue Words, in: Proceedings of CICLing 2011, Lecture Notes in Computer Science, pages 313-327, Springer, 2011 | , and ,
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Discovering and visualizing indirect associations between biomedical concepts (2011), in: Bioinformatics, 27:13(i111-i119) | , , , and ,
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Using Workflows to Explore and Optimise Named Entity Recognition for Chemistry (2011), in: PLoS ONE, 6:5(e20181) | , , , and ,
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Named Entity Recognition for Bacterial Type IV Secretion Systems (2011), in: PLoS ONE, 6:3(e14780) | , , , , , , , , and ,
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Medie and Info-pubmed: 2010 update (2010), in: BMC Bioinformatics, 11:Suppl 5(P7) | , , , , , and ,
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AGRA: Analysis of Gene Ranking Algorithms (2011), in: Bioinformatics, 27:8(1185-1186) | , , , , , , , and ,
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Sharable type system design for tool inter-operability and combinatorial comparison, in: Proceedings of the First International Conference on Global Interoperability for Language Resources (ICGL), pages 122--129, 2008 | , , , , , , , and ,
Analysis of gene ranking algorithms with extraction of relevant biomedical concepts from Pubmed publications, in: Proceedings of the 1st IEEE International Conference on Computational Advances in Bio and medical Sciences (ICCABS), 2011 | , , , , , , , and ,
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U-Compare: a modular NLP workflow construction and evaluation system (2011), in: IBM Journal of Research and Development, 55:3(11:1 - 11:10) | , , , , and ,
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Mining Metabolites: Extracting the Yeast Metabolome from the Literature (2011), in: Metabolomics, 7:1(94-101) | , , , , , and ,
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High-Precision Semantic Search by Generating and Testing Questions, in: Proceedings of the UK e-Science All Hands Meeting, 2010 | , , , , and ,
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Bio-Molecular Event Extraction with Markov Logic (2011), in: Computational Intelligence, 27:4(558-582) | , , , and ,
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Text Mining Meets Workflow: Linking U-Compare with Taverna (2010), in: Bioinformatics, 26:19(2486-2487) | , , , and ,
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Complex event extraction at PubMed scale (2010), in: Bioinformatics, 26:12(i382-i390) | , , , and ,
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A Comparative Study of Syntactic Parsers for Event Extraction, in: Proceedings of BioNLP 2010, ACL., pages 37--45, 2010 | , , and ,
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Entity-Focused Sentence Simplification for Relation Extraction, in: Proceedings of the 23rd International Conference on Computational Linguistics (COLING 2010), pages 788-796, 2010 | , , and ,
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Evaluating Dependency Representation for Event Extraction, in: Proceedings of the 23rd International Conference on Computational Linguistics (COLING 2010), pages 779-787, 2010 | , , and ,
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Extracting Protein-Interactions from Text with the Unified AkaneRE Event Extraction System (2010), in: Transactions on Computational Biology and Bioinformatics (TCBB), BioCreative II.5 Special Issue, 7:3(442-453) | , , , , and ,
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Improving the Inter-corpora Compatibility for Protein Annotations (2010), in: Journal of Bioinformatics and Computational Biology (JBCB), 8:5(901-916) | , , , , and ,
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Towards Event Extraction from Full Texts on Infectious Diseases, in: Proceedings of BioNLP 2010, ACL., pages 132--140, 2010 | , , , , , , and ,
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Imbalanced Classification Using Dictionary-based Prototypes and Hierarchical Decision Rules for Entity Sense Disambiguation, in: Proceedings of the 23rd International Conference on Computational Linguistics (COLING 2010), pages 851-859, 2010 | , , and ,
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Fine-grained Tree-to-String Translation Rule Extraction, in: Proceedings of The 48th Annual Meeting of the Association for Computational Linguistics (ACL 2010), pages 325--334, 2010 | , and ,
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Probabilistic Context-Free Grammars with Latent Annotations, in: Supertagging - Using Complex Lexical Descriptions in Natural Language Processing, pages 337--354, MIT Press, 2010 | , and ,